C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DnaJ (Hsp40) homolog, subfamily C, member 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000470551 DNAJC5-002 ENSG00000101152 9606 + 20:63895182-63936031 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000470551
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000470551 2.897±0.00 5.264±0.00 2.742±0.00 3.678±0.00 1.140±0.59 3.469±0.00 4.211±0.00 8.579±0.00 1.340±0.00 7.758±5.40 7.217±2.60 2.068±0.18

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004EZ CIL_0004EZ_0001 CGP 20:63865228-63936031
CIL_0004EY CIL_0004EY_0001 CGP 20:63895182-63956415

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005739 IDA mitochondrion
GO:0005765 IDA lysosomal membrane
GO:0005886 IDA plasma membrane
GO:0006887 NAS exocytosis
GO:0007268 TAS synaptic transmission
GO:0007269 TAS neurotransmitter secretion
GO:0008219 IEA cell death
GO:0016020 IDA membrane
GO:0016079 TAS synaptic vesicle exocytosis
GO:0045055 TAS regulated secretory pathway
GO:0061202 TAS clathrin-sculpted gamma-aminobutyric acid transport vesicle membrane
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000116365 Dnajc5-002 nonsense_mediated_decay Mus_musculus 0 1118
ENSMUST00000072334 Dnajc5-001 protein_coding Mus_musculus 0 625
ENSMUST00000108797 Dnajc5-003 protein_coding Mus_musculus 0 588
ENSMUST00000108796 Dnajc5-004 protein_coding Mus_musculus 0 586
ENSMUST00000152578 Dnajc5-005 protein_coding Mus_musculus 0 518
ENSMUST00000141523 Dnajc5-006 processed_transcript Mus_musculus 0 311

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