C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: tumor protein D52-like 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000474176 TPD52L2-004 ENSG00000101150 9606 + 20:63886882-63891545 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonOvaryTestisENST00000474176
Transcript ID Brain Colon Ovary Testis
ENST00000474176 2.539±0.00 0.454±0.00 2.924±0.00 4.758±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004F0 CIL_0004F0_0001 CGP 20:63861213-63891545
CIL_0004EZ CIL_0004EZ_0001 CGP 20:63865228-63936031

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000069712 Tpd52l2-004 protein_coding Mus_musculus 0 254
ENSMUST00000108800 Tpd52l2-003 protein_coding Mus_musculus 0 254
ENSMUST00000000844 Tpd52l2-002 protein_coding Mus_musculus 0 254
ENSMUST00000149163 Tpd52l2-001 protein_coding Mus_musculus 0 254
ENSMUST00000108799 Tpd52l2-009 protein_coding Mus_musculus 0 224
ENSMUST00000130261 Tpd52l2-012 retained_intron Mus_musculus 0 207
ENSMUST00000184849 Tpd52l2-007 protein_coding Mus_musculus 4e-27 128
ENSMUST00000184588 Tpd52l2-005 nonsense_mediated_decay Mus_musculus 3e-23 115

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