C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: serine/threonine kinase 16
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000475342 STK16-011 ENSG00000115661 9606 + 2:219245558-219247631 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000916 CIL_000916_0001 VISTA 2:219106772-219707284
CIL_000416 CIL_000416_0002 CGP 2:219229757-219245478
CIL_0006EH CIL_0006EH_0001 CGP 2:219236606-219250337
CIL_0006NV CIL_0006NV_0001 CGP 2:219245455-219278170

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000189698 Stk16-014 protein_coding Mus_musculus 0 435
ENSMUST00000142052 Stk16-010 processed_transcript Mus_musculus 0 435
ENSMUST00000135484 Stk16-002 retained_intron Mus_musculus 0 435
ENSMUST00000191108 Stk16-011 nonsense_mediated_decay Mus_musculus 0 435
ENSMUST00000027401 Stk16-001 protein_coding Mus_musculus 0 435
ENSMUST00000123825 Stk16-005 protein_coding Mus_musculus 0 433
ENSMUST00000144355 Stk16-004 protein_coding Mus_musculus 0 433
ENSMUST00000189242 Stk16-016 retained_intron Mus_musculus 0 207
ENSMUST00000186350 Stk16-015 retained_intron Mus_musculus 0 207
ENSMUST00000126328 Stk16-007 retained_intron Mus_musculus 0 207
ENSMUST00000145144 Stk16-006 retained_intron Mus_musculus 0 206
ENSMUST00000139627 Stk16-003 retained_intron Mus_musculus 3.00018e-42 176
ENSMUST00000188460 Stk16-012 protein_coding Mus_musculus 4.00001e-41 172
ENSMUST00000117869 Gm12004-001 processed_pseudogene Mus_musculus 3e-32 143

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