C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0006NV_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000115661-ENSG00000127824 CGP 9606 2:219245455-219278170
GeneTranscriptPositionBiotype
ENSG00000115661 (STK16)
serine/threonine kinase 16
ENST00000396738 (STK16-004) 219245479-219248892 protein_coding
ENST00000409260 (STK16-007) 219245892-219248891 protein_coding
ENST00000409516 (STK16-003) 219245483-219248746 protein_coding
ENST00000409638 (STK16-001) 219245455-219250337 protein_coding
ENST00000409743 (STK16-012) 219245896-219248702 protein_coding
ENST00000461417 (STK16-010) 219245479-219246967 retained_intron
ENST00000475342 (STK16-011) 219245558-219247631 retained_intron
ENST00000475696 (STK16-002) 219245479-219248191 retained_intron
ENST00000478018 (STK16-008) 219245895-219248895 retained_intron
ENST00000486813 (STK16-013) 219245896-219247534 processed_transcript
ENST00000491697 (STK16-009) 219245473-219246424 retained_intron
ENST00000496443 (STK16-005) 219245507-219248904 retained_intron
ENST00000496800 (STK16-006) 219245510-219247826 retained_intron
ENSG00000127824 (TUBA4A)
tubulin, alpha 4a
ENST00000248437 (TUBA4A-001) 219249711-219254032 protein_coding
ENST00000392088 (TUBA4A-002) 219249711-219254608 protein_coding
ENST00000398989 (TUBA4A-011) 219250772-219277876 protein_coding
ENST00000425551 (TUBA4A-009) 219251587-219252993 protein_coding
ENST00000427737 (TUBA4A-010) 219251113-219278170 protein_coding
ENST00000447205 (TUBA4A-003) 219251194-219253354 protein_coding
ENST00000456818 (TUBA4A-004) 219251173-219253145 protein_coding
ENST00000462806 (TUBA4A-007) 219251194-219253916 retained_intron
ENST00000475683 (TUBA4A-005) 219251539-219253916 retained_intron
ENST00000498660 (TUBA4A-006) 219250729-219253901 processed_transcript
ENSG00000163521 (GLB1L)
galactosidase, beta 1-like
ENST00000295759 (GLB1L-001) 219236606-219245472 protein_coding
ENST00000392089 (GLB1L-002) 219236771-219245478 protein_coding
ENST00000409640 (GLB1L-003) 219236766-219243614 protein_coding
ENST00000424620 (GLB1L-005) 219243308-219245444 protein_coding
ENST00000428427 (GLB1L-007) 219242814-219245406 protein_coding
ENST00000432839 (GLB1L-006) 219243547-219245441 protein_coding
ENST00000440853 (GLB1L-011) 219239883-219243184 protein_coding
ENST00000447002 (GLB1L-009) 219239422-219243598 nonsense_mediated_decay
ENST00000459951 (GLB1L-010) 219240154-219243372 retained_intron
ENST00000467548 (GLB1L-008) 219242843-219243598 retained_intron
ENST00000471516 (GLB1L-012) 219240049-219243106 retained_intron
ENST00000497855 (GLB1L-004) 219236761-219240234 processed_transcript
CIL_0006NV_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000026201-ENSMUSG00000026202 CGP 10090 1:75210838-75219865
GeneTranscriptPositionBiotype
ENSMUSG00000026202 (Tuba4a)
tubulin, alpha 4A
ENSMUST00000079464 (Tuba4a-002) 75214972-75218624 protein_coding
ENSMUST00000186213 (Tuba4a-001) 75214228-75219294 protein_coding
ENSMUST00000186758 (Tuba4a-004) 75216857-75219865 protein_coding
ENSMUST00000186971 (Tuba4a-008) 75215956-75217414 protein_coding
ENSMUST00000187103 (Tuba4a-005) 75216435-75219243 retained_intron
ENSMUST00000188593 (Tuba4a-003) 75215612-75217434 protein_coding
ENSMUST00000189131 (Tuba4a-007) 75216913-75218888 protein_coding
ENSMUST00000190717 (Tuba4a-006) 75216889-75218888 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006NV_0001ENSG00000115661ENST00000396738ENST00000409260ENST00000409638ENST00000409743ENSG00000127824ENST00000248437ENST00000392088ENST00000398989ENST00000498660ENSG00000163521ENST00000295759ENST00000497855CIL_0006NV_0002ENSMUSG00000026202ENSMUST00000079464ENSMUST00000186213ENSMUST00000186758ENSMUST00000186971ENSMUST00000187103ENSMUST00000188593
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000115661 ENST00000396738 N/A N/A N/A N/A N/A N/A N/A N/A 18.331±0.00 N/A N/A 24.666±9.10 12.308±1.96 48.259±0.00
ENST00000409260 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 10.049±0.00 N/A
ENST00000409516 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000409638 N/A N/A N/A N/A N/A N/A N/A 1.876±0.00 N/A N/A N/A N/A N/A N/A
ENST00000409743 N/A N/A N/A N/A N/A 24.597±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000461417 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475342 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475696 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478018 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486813 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491697 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496443 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496800 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000127824 ENST00000248437 N/A 31.969±0.00 N/A 34.070±15.58 15.677±0.00 17.043±0.00 4.796±0.00 34.053±0.00 3.080±0.00 60.684±0.00 N/A 17.627±9.55 8.909±0.00 N/A
ENST00000392088 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 25.547±0.00
ENST00000398989 N/A N/A N/A 41.625±0.00 N/A N/A N/A N/A N/A N/A 46.255±0.00 N/A N/A N/A
ENST00000425551 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000427737 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000447205 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000456818 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000462806 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475683 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000498660 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 31.031±0.00 N/A N/A N/A
ENSG00000163521 ENST00000295759 N/A N/A N/A N/A N/A N/A N/A 15.042±0.00 N/A N/A N/A 4.898±0.00 5.791±0.00 30.346±0.00
ENST00000392089 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000409640 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000424620 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000428427 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000432839 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000440853 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000447002 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000459951 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467548 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000471516 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497855 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.099±0.00 57.357±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026202 ENSMUST00000079464 N/A N/A N/A 90.397±0.00 15.214±3.22 N/A 59.098±3.80 26.335±0.00 39.601±17.28 15.816±3.25 52.974±10.74 N/A 8.033±3.11 23.447±3.18
ENSMUST00000186213 N/A N/A 7.981±1.61 N/A N/A N/A N/A N/A N/A N/A N/A 5.586±0.00 N/A N/A
ENSMUST00000186758 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 61.316±11.58
ENSMUST00000186971 N/A N/A N/A N/A 48.098±0.00 N/A N/A N/A N/A N/A N/A N/A 28.324±5.91 N/A
ENSMUST00000187103 N/A N/A N/A N/A N/A N/A N/A N/A 108.019±16.28 N/A 104.488±10.85 N/A N/A N/A
ENSMUST00000188593 N/A N/A 15.978±0.00 81.518±0.00 33.377±7.87 38.450±5.74 146.262±15.95 70.541±12.99 84.333±28.70 29.968±10.82 79.683±14.30 N/A 20.238±5.93 54.545±13.05
ENSMUST00000189131 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000190717 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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