C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: testis expressed 261
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000478068 TEX261-006 ENSG00000144043 9606 - 2:70985944-70989721 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartLiverLungMuscleOvaryENST00000478068
Transcript ID Adrenal Brain Breast Colon Heart Liver Lung Muscle Ovary
ENST00000478068 2.597±0.00 0.750±0.00 1.670±0.00 1.878±0.00 0.911±0.00 0.630±0.00 2.699±0.00 1.574±0.00 2.249±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003C5 CIL_0003C5_0001 CGP 2:70978380-70994945
CIL_0003C2 CIL_0003C2_0001 CGP 2:70985938-71079805

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000014892 Tex261-001 protein_coding Mus_musculus 0 348
ENSMUST00000137773 Tex261-004 retained_intron Mus_musculus 0 311
ENSMUST00000125614 Tex261-002 retained_intron Mus_musculus 0 213

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