C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L9 pseudogene 30
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000478775 RPL9P30-001 ENSG00000240074 9606 + 17:29855759-29856332 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonKidneyOvaryENST00000478775
Transcript ID Adrenal Bladder Brain Breast Colon Kidney Ovary
ENST00000478775 0.054±0.00 0.753±0.00 0.223±0.05 0.270±0.24 1.155±0.00 0.783±0.71 0.586±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009BZ CIL_0009BZ_0001 VISTA 17:29367684-29969856
CIL_000873 CIL_000873_0001 VISTA 17:29367702-29969870

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000121601 Gm12110-001 processed_pseudogene Mus_musculus 0 383
ENSMUST00000129885 Gm14562-001 processed_pseudogene Mus_musculus 0 239
ENSMUST00000121372 Gm14732-001 processed_pseudogene Mus_musculus 0 224
ENSMUST00000119911 Gm15828-001 processed_pseudogene Mus_musculus 2e-22 110

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