C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: prostaglandin I2 (prostacyclin) synthase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000478971 PTGIS-002 ENSG00000124212 9606 - 20:49507901-49568116 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonHeartKidneyMusclePlacentaENST00000478971
Transcript ID Brain Breast Colon Heart Kidney Muscle Placenta
ENST00000478971 0.408±0.00 3.693±0.00 1.594±0.00 1.446±0.00 1.161±0.00 2.008±0.00 0.288±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006IT CIL_0006IT_0002 CGP 20:49363877-49568146
CIL_0008I4 CIL_0008I4_0001 VISTA 20:49375075-49977641
CIL_0001RU CIL_0001RU_0001 CGP 20:49503874-49713878

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000018113 Ptgis-001 protein_coding Mus_musculus 0 1062
ENSMUST00000088041 Ptgis-002 protein_coding Mus_musculus 0 979
ENSMUST00000136271 Ptgis-003 retained_intron Mus_musculus 0 196

Loading