C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger protein 282
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000479907 ZNF282-002 ENSG00000170265 9606 + 7:149195550-149224663 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonKidneyLungOvaryPlacentaTestisENST00000479907
Transcript ID Bladder Brain Breast Colon Kidney Lung Ovary Placenta Testis
ENST00000479907 1.069±0.00 0.997±0.00 1.853±0.00 1.308±0.00 1.301±0.00 1.491±0.00 3.479±0.05 5.195±0.00 1.577±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004XN CIL_0004XN_0001 CGP 7:149126416-149226248
CIL_0004XQ CIL_0004XQ_0001 CGP 7:149195485-149255609

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 TAS:IEA regulation of transcription, DNA-templated
GO:0008270 NAS zinc ion binding
GO:0045892 TAS negative regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000061890 Zfp282-001 protein_coding Mus_musculus 0 1624
ENSMUST00000125957 Zfp282-002 retained_intron Mus_musculus 0 1166
ENSMUST00000156500 Zfp212-002 retained_intron Mus_musculus 0 302
ENSMUST00000009411 Zfp212-001 protein_coding Mus_musculus 0 302
ENSMUST00000122048 Gm1401-001 processed_pseudogene Mus_musculus 0 200
ENSMUST00000140719 Zfp956-002 nonsense_mediated_decay Mus_musculus 1.99965e-42 178
ENSMUST00000101445 Zfp956-001 protein_coding Mus_musculus 1.99965e-42 178
ENSMUST00000174790 Zfp956-003 retained_intron Mus_musculus 3e-40 171

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