C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: LAS1-like (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000484069 LAS1L-005 ENSG00000001497 9606 - X:65512583-65534775 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalColonLungMuscleOvaryPlacentaTestisENST00000484069
Transcript ID Adrenal Colon Lung Muscle Ovary Placenta Testis
ENST00000484069 0.928±0.00 0.520±0.05 0.387±0.00 0.218±0.00 1.231±0.09 0.640±0.00 5.263±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001SP CIL_0001SP_0002 CGP X:65366638-65534775
CIL_0003JT CIL_0003JT_0002 CGP X:65512582-65741931

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005815 IDA microtubule organizing center
GO:0006364 IEA rRNA processing
GO:0016020 IDA membrane
GO:0044822 IDA poly(A) RNA binding
GO:0071339 IDA MLL1 complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000113864 Las1l-007 protein_coding Mus_musculus 0 616
ENSMUST00000079987 Las1l-001 protein_coding Mus_musculus 0 564
ENSMUST00000126605 Las1l-002 retained_intron Mus_musculus 0 562
ENSMUST00000137659 Las1l-005 processed_transcript Mus_musculus 0 444
ENSMUST00000152181 Las1l-006 processed_transcript Mus_musculus 0 431
ENSMUST00000139717 Las1l-003 retained_intron Mus_musculus 0 366
ENSMUST00000147994 Las1l-004 processed_transcript Mus_musculus 7e-36 158

Loading