C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: excision repair cross-complementation group 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000485403 ERCC2-006 ENSG00000104884 9606 - 19:45358759-45370384 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryPlacentaTestisENST00000485403
Transcript ID Ovary Placenta Testis
ENST00000485403 2.294±0.00 1.128±0.00 4.206±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000718 TAS nucleotide-excision repair, DNA damage removal
GO:0003677 IEA DNA binding
GO:0004003 IEA ATP-dependent DNA helicase activity
GO:0004672 IDA protein kinase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005634 IDA:IEA nucleus
GO:0005654 TAS nucleoplasm
GO:0005675 TAS holo TFIIH complex
GO:0005737 IDA cytoplasm
GO:0005819 IDA spindle
GO:0006200 IEA ATP catabolic process
GO:0006281 TAS DNA repair
GO:0006283 IDA transcription-coupled nucleotide-excision repair
GO:0006289 NAS nucleotide-excision repair
GO:0006360 TAS transcription from RNA polymerase I promoter
GO:0006361 TAS transcription initiation from RNA polymerase I promoter
GO:0006362 TAS transcription elongation from RNA polymerase I promoter
GO:0006363 TAS termination of RNA polymerase I transcription
GO:0006366 TAS transcription from RNA polymerase II promoter
GO:0006367 TAS transcription initiation from RNA polymerase II promoter
GO:0006368 TAS transcription elongation from RNA polymerase II promoter
GO:0006370 TAS 7-methylguanosine mRNA capping
GO:0006468 IDA protein phosphorylation
GO:0006915 IMP apoptotic process
GO:0006979 IMP response to oxidative stress
GO:0007059 IMP chromosome segregation
GO:0008022 IPI protein C-terminus binding
GO:0008094 TAS DNA-dependent ATPase activity
GO:0008353 IDA RNA polymerase II carboxy-terminal domain kinase activity
GO:0009650 IGI UV protection
GO:0010467 TAS gene expression
GO:0016032 TAS viral process
GO:0016818 IEA hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
GO:0019907 IDA cyclin-dependent protein kinase activating kinase holoenzyme complex
GO:0032508 IEA DNA duplex unwinding
GO:0033683 IMP nucleotide-excision repair, DNA incision
GO:0035315 IMP hair cell differentiation
GO:0043139 IDA 5'-3' DNA helicase activity
GO:0044281 TAS small molecule metabolic process
GO:0045893 IDA positive regulation of transcription, DNA-templated
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0046872 IEA metal ion binding
GO:0047485 IPI protein N-terminus binding
GO:0050434 TAS positive regulation of viral transcription
GO:0051539 IEA 4 iron, 4 sulfur cluster binding
GO:0071817 IDA MMXD complex
GO:1901990 IMP regulation of mitotic cell cycle phase transition

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000062831 Ercc2-001 protein_coding Mus_musculus 0 1504
ENSMUST00000108460 Ercc2-003 protein_coding Mus_musculus 0 1166
ENSMUST00000129249 Ercc2-004 protein_coding Mus_musculus 0 798
ENSMUST00000127363 Ercc2-006 processed_transcript Mus_musculus 0 651

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