C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: small muscle protein, X-linked
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000494525 SMPX-002 ENSG00000091482 9606 - X:21706338-21758022 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverLungOvaryENST00000494525
Transcript ID Liver Lung Ovary
ENST00000494525 0.041±0.00 0.126±0.00 0.031±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002L0 CIL_0002L0_0002 CGP X:21654690-21758163
CIL_0002L6 CIL_0002L6_0002 CGP X:21705972-21885424

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000190091 Smpx-201 protein_coding Mus_musculus 0 322
ENSMUST00000038007 Smpx-001 nonsense_mediated_decay Mus_musculus 0 322
ENSMUST00000112521 Smpx-005 protein_coding Mus_musculus 0 320
ENSMUST00000112520 Smpx-003 protein_coding Mus_musculus 0 268
ENSMUST00000147283 Smpx-004 nonsense_mediated_decay Mus_musculus 0 215
ENSMUST00000132805 Smpx-006 retained_intron Mus_musculus 0 213

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