C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger, CCHC domain containing 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000500893 ZCCHC3-001 ENSG00000247315 9606 + 20:296968-300321 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000500893
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000500893 4.065±0.00 7.397±0.00 0.877±0.00 2.982±1.74 2.810±1.18 3.545±2.14 2.353±1.84 4.102±3.24 2.585±0.90 3.870±2.71 2.099±1.79 11.824±5.75 16.757±2.70 8.739±0.27

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00096R CIL_00096R_0001 VISTA 20:23407-624368

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0008270 IEA zinc ion binding
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000099207 Zcchc3-001 protein_coding Mus_musculus 0 1520
ENSMUST00000118541 Gm11779-001 processed_pseudogene Mus_musculus 0 490

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