C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: multiple C2 domains, transmembrane 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000505078 MCTP1-017 ENSG00000175471 9606 - 5:94706591-94929701 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainKidneyLiverMuscleOvaryPlacentaTestisENST00000505078
Transcript ID Brain Kidney Liver Muscle Ovary Placenta Testis
ENST00000505078 3.725±0.00 0.205±0.00 1.819±0.00 0.326±0.00 0.123±0.00 0.468±0.18 0.248±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007N1 CIL_0007N1_0004 UCNEbase 5:93909238-94893742

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IDA calcium ion binding
GO:0005515 IEA protein binding
GO:0016021 IDA integral component of membrane
GO:0019722 NAS calcium-mediated signaling

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000125209 Mctp1-001 protein_coding Mus_musculus 0 2490
ENSMUST00000109583 Mctp1-201 protein_coding Mus_musculus 0 2290
ENSMUST00000137052 Mctp1-004 retained_intron Mus_musculus 0 1483
ENSMUST00000122843 Mctp1-005 retained_intron Mus_musculus 0 1319
ENSMUST00000155275 Mctp1-007 retained_intron Mus_musculus 0 497
ENSMUST00000126960 Mctp1-002 protein_coding Mus_musculus 0 366
ENSDART00000086220 mctp1b-201 protein_coding Danio_rerio 0 340
ENSMUST00000149028 Mctp1-006 retained_intron Mus_musculus 0 311

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