C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chromosome 5 open reading frame 30
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000510890 C5orf30-002 ENSG00000181751 9606 + 5:103259424-103278371 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000510890
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000510890 3.419±0.00 1.801±0.12 2.226±2.05 1.344±0.00 0.596±0.00 1.089±0.00 0.114±0.00 0.819±0.00 2.475±0.00 0.942±0.31 1.076±0.41 1.761±0.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005KF CIL_0005KF_0002 CGP 5:103120149-103278660

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0015031 IEA protein transport
GO:0035869 IDA ciliary transition zone
GO:0060271 ISS cilium morphogenesis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000153115 D1Ertd622e-003 protein_coding Mus_musculus 0 2422
ENSMUST00000053033 D1Ertd622e-001 protein_coding Mus_musculus 0 2422
ENSMUST00000149927 D1Ertd622e-002 protein_coding Mus_musculus 0 2314
ENSMUST00000120030 Gm14608-001 processed_pseudogene Mus_musculus 0 789

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