C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000511402 CTD-2593A12.4-001 ENSG00000231228 9606 + 5:180982273-180982611 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainTestisENST00000511402
Transcript ID Adipose Brain Testis
ENST00000511402 0.084±0.00 0.046±0.00 0.125±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000XH CIL_0000XH_0005 CGP 5:180899077-181006727

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000169492 Arpp19-201 protein_coding Mus_musculus 0 427
ENSMUST00000007800 Arpp19-007 protein_coding Mus_musculus 0 427
ENSMUST00000164467 Arpp19-009 nonsense_mediated_decay Mus_musculus 0 427
ENSMUST00000170308 Arpp19-010 protein_coding Mus_musculus 0 427
ENSMUST00000168166 Arpp19-001 protein_coding Mus_musculus 0 427
ENSMUST00000168301 Arpp19-008 protein_coding Mus_musculus 0 414
ENSMUST00000166549 Arpp19-005 protein_coding Mus_musculus 0 387
ENSMUST00000170310 Arpp19-004 protein_coding Mus_musculus 0 385
ENSMUST00000167885 Arpp19-002 protein_coding Mus_musculus 0 383

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