C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chromosome 5 open reading frame 30
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000515669 C5orf30-003 ENSG00000181751 9606 + 5:103259036-103277228 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBreastColonHeartKidneyLiverLungMuscleOvaryENST00000515669
Transcript ID Adrenal Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary
ENST00000515669 0.381±0.00 0.489±0.00 0.333±0.00 2.964±0.00 0.272±0.00 0.349±0.00 0.316±0.19 0.184±0.00 0.773±0.00 1.186±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005KF CIL_0005KF_0002 CGP 5:103120149-103278660

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0015031 IEA protein transport
GO:0035869 IDA ciliary transition zone
GO:0060271 ISS cilium morphogenesis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000153115 D1Ertd622e-003 protein_coding Mus_musculus 0 1764
ENSMUST00000053033 D1Ertd622e-001 protein_coding Mus_musculus 0 1760
ENSMUST00000149927 D1Ertd622e-002 protein_coding Mus_musculus 0 1653
ENSMUST00000120030 Gm14608-001 processed_pseudogene Mus_musculus 0 789

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