C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: endothelial cell surface expressed chemotaxis and apoptosis regulator
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000515823 ECSCR-001 ENSG00000279686 9606 - 5:139442316-139462707 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryPlacentaENST00000515823
Transcript ID Ovary Placenta
ENST00000515823 1.795±0.00 7.223±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000546 CIL_000546_0001 CGP 5:139396563-139444491

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001525 IEA angiogenesis
GO:0005737 IEA cytoplasm
GO:0005886 IEA plasma membrane
GO:0006915 IEA apoptotic process
GO:0006935 IEA chemotaxis
GO:0016021 IEA integral component of membrane
GO:0030154 IEA cell differentiation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000133064 Ecscr-002 protein_coding Mus_musculus 0 375
ENSMUST00000097618 Ecscr-001 protein_coding Mus_musculus 0 375
ENSMUST00000123973 Ecscr-006 protein_coding Mus_musculus 0 244
ENSMUST00000134656 Ecscr-005 protein_coding Mus_musculus 0 244
ENSMUST00000143778 1700066B19Rik-002 processed_transcript Mus_musculus 0.000000000000002 88

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