C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: golgin A7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000520817 GOLGA7-002 ENSG00000147533 9606 + 8:41490482-41510980 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000520817
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000520817 6.764±0.00 10.222±2.23 5.386±4.56 3.500±1.39 1.904±0.72 9.883±0.00 4.069±0.00 2.797±1.69 1.447±0.00 10.282±7.12 12.014±0.00 14.792±7.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005LU CIL_0005LU_0002 CGP 8:41261958-41510980

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002178 IDA palmitoyltransferase complex
GO:0005515 IPI protein binding
GO:0005795 IDA Golgi stack
GO:0018230 IDA peptidyl-L-cysteine S-palmitoylation
GO:0031228 IDA intrinsic component of Golgi membrane
GO:0043001 IDA Golgi to plasma membrane protein transport
GO:0050821 IDA protein stabilization
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000051094 Golga7-001 protein_coding Mus_musculus 0 795
ENSMUST00000121783 Golga7-002 protein_coding Mus_musculus 0 741
ENSMUST00000061226 Gm8508-201 pseudogene Mus_musculus 0 566
ENSMUST00000119858 Gm6829-001 processed_pseudogene Mus_musculus 0 473
ENSMUST00000189199 RP23-389C9.4-001 processed_pseudogene Mus_musculus 0 372
ENSMUST00000135646 Golga7-004 retained_intron Mus_musculus 2.00386e-43 182

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