C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: v-myb avian myeloblastosis viral oncogene homolog-like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000524176 MYBL1-002 ENSG00000185697 9606 - 8:66564697-66612907 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastKidneyLiverLungPlacentaTestisENST00000524176
Transcript ID Adipose Breast Kidney Liver Lung Placenta Testis
ENST00000524176 0.090±0.00 0.229±0.14 0.196±0.00 0.356±0.00 0.824±0.00 0.228±0.00 5.063±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00031E CIL_00031E_0001 CGP 8:66460003-66614247
CIL_00050B CIL_00050B_0001 CGP 8:66562175-66667217

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000978 IDA RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0001077 IDA RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
GO:0003677 IEA DNA binding
GO:0003682 IEA chromatin binding
GO:0005634 NAS nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0045893 NAS positive regulation of transcription, DNA-templated
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000115468 Mybl1-002 protein_coding Mus_musculus 0 2863
ENSMUST00000088658 Mybl1-001 protein_coding Mus_musculus 0 2675
ENSMUST00000188212 Mybl1-005 protein_coding Mus_musculus 0 1118
ENSMUST00000160022 Mybl1-004 retained_intron Mus_musculus 0 544
ENSMUST00000160451 Mybl1-003 retained_intron Mus_musculus 0 470

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