C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ring finger protein 214
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000531452 RNF214-001 ENSG00000167257 9606 + 11:117232736-117285688 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonLiverMuscleOvaryPlacentaENST00000531452
Transcript ID Bladder Brain Breast Colon Liver Muscle Ovary Placenta
ENST00000531452 1.967±0.00 2.127±0.00 1.415±0.00 1.854±0.00 2.267±0.00 0.736±0.00 1.431±0.00 2.474±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007RC CIL_0007RC_0001 VISTA 11:116660805-117262910

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000161203 Rnf214-003 protein_coding Mus_musculus 0 2516
ENSMUST00000160699 Rnf214-002 protein_coding Mus_musculus 0 2361
ENSMUST00000162369 Rnf214-006 retained_intron Mus_musculus 0 2361
ENSMUST00000058720 Rnf214-001 protein_coding Mus_musculus 0 2361
ENSMUST00000162699 Rnf214-004 nonsense_mediated_decay Mus_musculus 0 2281
ENSMUST00000161187 Rnf214-005 protein_coding Mus_musculus 0 1668
ENSMUST00000160325 Rnf214-009 retained_intron Mus_musculus 0 743
ENSMUST00000100407 Rnf214-011 retained_intron Mus_musculus 0 195
ENSMUST00000160868 Rnf214-010 retained_intron Mus_musculus 6.02558e-44 183

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