C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ANKHD1-EIF4EBP3 readthrough
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000532219 ANKHD1-EIF4EBP3-001 ENSG00000254996 9606 + 5:140401908-140549569 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainHeartKidneyLungMuscleOvaryPlacentaTestisENST00000532219
Transcript ID Adipose Adrenal Brain Heart Kidney Lung Muscle Ovary Placenta Testis
ENST00000532219 4.536±0.00 7.884±0.00 3.086±0.00 7.244±0.00 5.850±0.00 4.070±1.33 7.409±0.00 7.768±0.00 7.121±0.00 9.512±1.77

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006ZO CIL_0006ZO_0001 CGP 5:140360202-140539856

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003723 IEA RNA binding
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000142977 Ankhd1-015 nonsense_mediated_decay Mus_musculus 0 10560
ENSMUST00000006205 Ankhd1-001 nonsense_mediated_decay Mus_musculus 0 9989
ENSMUST00000155329 Ankhd1-014 protein_coding Mus_musculus 0 9289
ENSMUST00000037072 Ankhd1-016 protein_coding Mus_musculus 0 3408
ENSMUST00000140061 Ankhd1-018 protein_coding Mus_musculus 0 1258
ENSMUST00000152060 Ankhd1-005 protein_coding Mus_musculus 0 808
ENSMUST00000134146 Ankhd1-004 protein_coding Mus_musculus 0 760
ENSDART00000112410 ankhd1-201 protein_coding Danio_rerio 0 741
ENSDART00000147947 ankhd1-001 protein_coding Danio_rerio 0 741
ENSMUST00000142780 Ankhd1-006 processed_transcript Mus_musculus 0 715
ENSMUST00000136030 Ankhd1-007 protein_coding Mus_musculus 0 693
ENSMUST00000130035 Ankhd1-009 nonsense_mediated_decay Mus_musculus 0 464
ENSMUST00000143966 Ankhd1-013 retained_intron Mus_musculus 0 442
ENSMUST00000036765 Eif4ebp3-001 protein_coding Mus_musculus 0 435
ENSMUST00000153612 Ankhd1-010 nonsense_mediated_decay Mus_musculus 0 388
ENSMUST00000156424 Ankhd1-008 retained_intron Mus_musculus 0 287

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