C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | proteoglycan 4 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000533951  |
PRG4-005 |
ENSG00000116690 |
9606 | + |
1:186296279-186306478  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0001BO | CIL_0001BO_0003 | CGP | 1:186296279-186375693 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005044 | IEA | scavenger receptor activity |
| GO:0006898 | IEA | receptor-mediated endocytosis |
| GO:0006955 | IEA | immune response |
| GO:0030247 | IEA | polysaccharide binding |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000111902
|
Prg4-203 | protein_coding | Mus_musculus | 0 | 263 |
|
ENSMUST00000164600
|
Prg4-204 | protein_coding | Mus_musculus | 0 | 263 |
|
ENSMUST00000161611
|
Prg4-002 | protein_coding | Mus_musculus | 0 | 263 |
|
ENSDART00000152232
|
nt5c2b-003 | retained_intron | Danio_rerio | 0.0001 | 53 |
|
ENSDART00000152493
|
nt5c2b-002 | retained_intron | Danio_rerio | 0.0001 | 53 |
|
ENSDART00000065125
|
nt5c2b-001 | protein_coding | Danio_rerio | 0.0001 | 53 |
|
ENSDART00000126286
|
nt5c2b-201 | protein_coding | Danio_rerio | 0.0003 | 53 |
