C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: proteoglycan 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000116690 PRG4 9606 + 1:186296279-186314562 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000367482 PRG4-004 186296279-186308682 protein_coding
  ENST00000367483 PRG4-002 186296279-186314562 protein_coding
  ENST00000367485 PRG4-003 186296279-186314562 protein_coding
  ENST00000445192 PRG4-001 186296279-186314562 protein_coding
  ENST00000533951 PRG4-005 186296279-186306478 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartKidneyLiverMuscleENST00000367485
Transcript ID Heart Kidney Liver Muscle
ENST00000367485 1.504±0.00 28.140±0.00 40.293±0.00 2.608±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001BO CIL_0001BO_0003 CGP 1:186296279-186375693

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005044 IEA scavenger receptor activity
GO:0005615 IEA extracellular space
GO:0006898 IEA receptor-mediated endocytosis
GO:0006955 IEA immune response
GO:0008283 TAS cell proliferation
GO:0030247 IEA polysaccharide binding
GO:0042127 IEA regulation of cell proliferation
GO:0045409 IEA negative regulation of interleukin-6 biosynthetic process
GO:0071425 IEA hematopoietic stem cell proliferation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000010482 prg4a proteoglycan 4a protein_coding Danio_rerio
ENSDARG00000028163 prg4b proteoglycan 4b protein_coding Danio_rerio
ENSMUSG00000006014 Prg4 proteoglycan 4 (megakaryocyte stimulating factor, articular superficial zone protein) protein_coding Mus_musculus

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