C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: A kinase (PRKA) anchor protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000539273 AKAP1-006 ENSG00000121057 9606 + 17:57096578-57120555 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; PlacentaTestisENST00000539273
Transcript ID Placenta Testis
ENST00000539273 1.913±0.00 41.165±19.93

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003723 TAS:IEA RNA binding
GO:0005515 IPI protein binding
GO:0005739 IDA mitochondrion
GO:0005741 IEA mitochondrial outer membrane
GO:0005829 TAS cytosol
GO:0007596 TAS blood coagulation
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000018572 Akap1-002 protein_coding Mus_musculus 0 1583
ENSMUST00000107903 Akap1-001 protein_coding Mus_musculus 0 1583
ENSMUST00000107904 Akap1-006 protein_coding Mus_musculus 0 1557
ENSMUST00000143720 Akap1-003 nonsense_mediated_decay Mus_musculus 0 1297
ENSMUST00000153961 Akap1-005 retained_intron Mus_musculus 0 730
ENSMUST00000153787 Akap1-004 nonsense_mediated_decay Mus_musculus 0 425
ENSDART00000025713 akap1b-201 protein_coding Danio_rerio 0 241
ENSDART00000112511 akap1b-202 protein_coding Danio_rerio 0 241
ENSDART00000138988 akap1b-001 protein_coding Danio_rerio 0 241
ENSDART00000136673 akap1b-004 retained_intron Danio_rerio 0 226
ENSDART00000134878 akap1b-003 processed_transcript Danio_rerio 0 220

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