C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: programmed cell death 5 pseudogene 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000543528 PDCD5P1-001 ENSG00000255909 9606 + 12:19413153-19413461 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastOvaryPlacentaTestisENST00000543528
Transcript ID Breast Ovary Placenta Testis
ENST00000543528 0.036±0.00 0.527±0.46 0.685±0.00 0.706±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005FL CIL_0005FL_0001 CGP 12:19129752-19720801

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000120714 Pdcd5-003 protein_coding Mus_musculus 0 403
ENSMUST00000118501 Pdcd5-001 protein_coding Mus_musculus 0 403
ENSMUST00000126734 Pdcd5-006 retained_intron Mus_musculus 0 263
ENSMUST00000151336 Pdcd5-007 retained_intron Mus_musculus 3e-38 161
ENSMUST00000130306 Pdcd5-005 retained_intron Mus_musculus 2e-34 148
ENSMUST00000127213 Pdcd5-004 retained_intron Mus_musculus 2e-34 148

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