C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000544904 RCBTB2-203 ENSG00000136161 9606 - 13:48488970-48533256 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000544904
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000544904 2.012±0.00 0.817±0.00 0.918±0.00 1.886±0.00 3.456±0.00 1.765±0.83 0.859±0.00 3.150±1.61 0.744±0.05 1.402±0.00 0.751±0.20 3.321±2.39 3.832±1.72 2.979±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005087 TAS Ran guanyl-nucleotide exchange factor activity
GO:0005515 IEA protein binding
GO:0032853 TAS positive regulation of Ran GTPase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000169513 Rcbtb2-002 protein_coding Mus_musculus 0 2050
ENSMUST00000110952 Rcbtb2-201 protein_coding Mus_musculus 0 2043
ENSMUST00000169479 Rcbtb2-202 protein_coding Mus_musculus 0 2043
ENSMUST00000022702 Rcbtb2-008 protein_coding Mus_musculus 0 2043
ENSMUST00000170677 Rcbtb2-009 protein_coding Mus_musculus 0 2043
ENSMUST00000164822 Rcbtb2-001 protein_coding Mus_musculus 0 2043
ENSMUST00000171767 Rcbtb2-006 protein_coding Mus_musculus 0 1844
ENSMUST00000164298 Rcbtb2-011 nonsense_mediated_decay Mus_musculus 0 985
ENSMUST00000163797 Rcbtb2-010 nonsense_mediated_decay Mus_musculus 0 865
ENSMUST00000165429 Rcbtb2-024 protein_coding Mus_musculus 0 730
ENSMUST00000165567 Rcbtb2-022 protein_coding Mus_musculus 0 680
ENSMUST00000163533 Rcbtb2-019 protein_coding Mus_musculus 0 584
ENSMUST00000022551 Rcbtb1-003 protein_coding Mus_musculus 0 499
ENSMUST00000174009 Rcbtb1-002 nonsense_mediated_decay Mus_musculus 0 499
ENSMUST00000043227 Rcbtb1-001 protein_coding Mus_musculus 0 499
ENSMUST00000170370 Rcbtb2-015 protein_coding Mus_musculus 0 488
ENSMUST00000171163 Rcbtb2-003 retained_intron Mus_musculus 0 433
ENSMUST00000170368 Rcbtb2-017 protein_coding Mus_musculus 0 313
ENSMUST00000172810 Rcbtb1-011 nonsense_mediated_decay Mus_musculus 0 283
ENSMUST00000171070 Rcbtb2-014 protein_coding Mus_musculus 0 257
ENSMUST00000167401 Rcbtb2-021 protein_coding Mus_musculus 0 244

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