C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: forkhead box J3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000545068 FOXJ3-203 ENSG00000198815 9606 - 1:42176545-42315459 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonLungENST00000545068
Transcript ID Bladder Brain Colon Lung
ENST00000545068 2.531±0.00 7.526±0.00 2.287±0.00 3.572±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0043565 IEA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000044564 Foxj3-001 protein_coding Mus_musculus 0 3197
ENSMUST00000106310 Foxj3-002 protein_coding Mus_musculus 0 2176
ENSMUST00000161196 Foxj3-008 retained_intron Mus_musculus 0 835
ENSMUST00000162267 Foxj3-007 protein_coding Mus_musculus 0 719
ENSMUST00000138845 Foxj3-004 protein_coding Mus_musculus 0 717
ENSMUST00000160219 Foxj3-009 protein_coding Mus_musculus 0 538
ENSMUST00000137560 Foxj3-005 protein_coding Mus_musculus 0 394
ENSMUST00000133097 Foxj3-006 processed_transcript Mus_musculus 0 375
ENSMUST00000176012 Foxj3-010 protein_coding Mus_musculus 0 353
ENSMUST00000131413 Foxj3-003 retained_intron Mus_musculus 2e-22 113

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