C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: vezatin, adherens junctions transmembrane protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000547997 VEZT-002 ENSG00000028203 9606 + 12:95217761-95301172 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000547997
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000547997 1.751±0.00 2.566±0.00 5.203±0.26 7.908±0.00 2.573±1.15 3.448±0.00 1.025±0.00 2.329±0.00 2.654±0.00 5.735±0.56 5.419±0.41 3.136±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000Y0 CIL_0000Y0_0002 CGP 12:95076749-95302790
CIL_0000Y1 CIL_0000Y1_0002 CGP 12:95217746-95515839

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0016021 IEA integral component of membrane
GO:0017022 IEA myosin binding
GO:0030054 IEA cell junction
GO:0031410 IEA cytoplasmic vesicle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000047711 Vezt-002 protein_coding Mus_musculus 0 2204
ENSMUST00000119818 Vezt-001 protein_coding Mus_musculus 0 2148
ENSMUST00000118077 Vezt-007 protein_coding Mus_musculus 0 1701
ENSMUST00000118205 Vezt-006 protein_coding Mus_musculus 0 1701
ENSMUST00000141241 Vezt-004 nonsense_mediated_decay Mus_musculus 0 556
ENSMUST00000150704 Vezt-003 nonsense_mediated_decay Mus_musculus 0 370
ENSMUST00000123201 Vezt-005 protein_coding Mus_musculus 0 302
ENSMUST00000132735 Vezt-010 retained_intron Mus_musculus 0 285

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