C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: P2RX5-TAX1BP3 readthrough (NMD candidate)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000550383 P2RX5-TAX1BP3-001 ENSG00000257950 9606 - 17:3663063-3696194 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainLiverLungENST00000550383
Transcript ID Bladder Brain Liver Lung
ENST00000550383 0.201±0.00 1.087±0.00 0.489±0.00 0.238±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00060X CIL_00060X_0002 CGP 17:3663063-3696194

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001614 IEA purinergic nucleotide receptor activity
GO:0005216 IEA ion channel activity
GO:0005524 IEA ATP binding
GO:0006811 IEA ion transport
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000054952 Emc6-001 protein_coding Mus_musculus 0 673
ENSMUST00000108480 Emc6-002 protein_coding Mus_musculus 0 558
ENSMUST00000040687 Tax1bp3-001 protein_coding Mus_musculus 0 507
ENSMUST00000121239 Gm13597-001 processed_pseudogene Mus_musculus 0 435
ENSMUST00000108477 Tax1bp3-004 protein_coding Mus_musculus 0 259
ENSMUST00000150407 Tax1bp3-002 retained_intron Mus_musculus 0 259

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