C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: aquaporin 2 (collecting duct)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000551526 AQP2-003 ENSG00000167580 9606 + 12:49950741-49958373 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverOvaryENST00000551526
Transcript ID Liver Ovary
ENST00000551526 0.060±0.00 0.079±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000IN CIL_0000IN_0001 CGP 12:49866896-49958881
CIL_0008PE CIL_0008PE_0001 VISTA 12:49905565-50507504
CIL_0008CC CIL_0008CC_0001 VISTA 12:49906068-50507455
CIL_00071Z CIL_00071Z_0001 CGP 12:49950741-49965681

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005215 IEA transporter activity
GO:0006810 IEA transport
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000023752 Aqp2-201 protein_coding Mus_musculus 0 734

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