C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: vezatin, adherens junctions transmembrane protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000552660 VEZT-005 ENSG00000028203 9606 + 12:95217812-95300921 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000552660
Transcript ID Adipose Bladder Brain Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000552660 2.154±0.00 3.869±0.00 3.717±0.00 5.971±0.00 1.912±0.05 3.295±0.00 3.813±2.93 3.972±0.41 2.459±0.00 4.491±0.00 2.887±1.03 1.987±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000Y0 CIL_0000Y0_0002 CGP 12:95076749-95302790
CIL_0000Y1 CIL_0000Y1_0002 CGP 12:95217746-95515839

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0016021 IEA integral component of membrane
GO:0017022 IEA myosin binding
GO:0030054 IEA cell junction
GO:0031410 IEA cytoplasmic vesicle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000119818 Vezt-001 protein_coding Mus_musculus 0 2102
ENSMUST00000047711 Vezt-002 protein_coding Mus_musculus 0 2030
ENSMUST00000118077 Vezt-007 protein_coding Mus_musculus 0 1652
ENSMUST00000118205 Vezt-006 protein_coding Mus_musculus 0 1652
ENSMUST00000141241 Vezt-004 nonsense_mediated_decay Mus_musculus 0 634
ENSMUST00000150704 Vezt-003 nonsense_mediated_decay Mus_musculus 0 392
ENSMUST00000132735 Vezt-010 retained_intron Mus_musculus 0 276
ENSMUST00000123201 Vezt-005 protein_coding Mus_musculus 0 276

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