C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000554198 RP11-493G17.4-001 ENSG00000258510 9606 + 14:77359423-77359916 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastHeartKidneyLiverPlacentaTestisENST00000554198
Transcript ID Adrenal Brain Breast Heart Kidney Liver Placenta Testis
ENST00000554198 0.470±0.00 0.044±0.00 0.505±0.44 0.397±0.00 0.109±0.00 1.741±0.00 0.051±0.00 0.151±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003P1 CIL_0003P1_0001 CGP 14:77320884-77377109
CIL_00077I CIL_00077I_0001 CGP 14:77335021-77391497

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000114294 Abcg2-007 protein_coding Mus_musculus 0 289
ENSMUST00000143752 Abcg2-004 nonsense_mediated_decay Mus_musculus 0 289
ENSMUST00000145161 Abcg2-008 protein_coding Mus_musculus 0 289
ENSMUST00000031822 Abcg2-001 protein_coding Mus_musculus 0 289
ENSMUST00000124542 Abcg2-002 retained_intron Mus_musculus 0 198
ENSMUST00000147213 Abcg2-009 protein_coding Mus_musculus 1.4013e-45 187
ENSMUST00000143447 Abcg2-006 processed_transcript Mus_musculus 8e-36 154

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