C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger protein 285B, pseudogene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000561698 ZNF285B-001 ENSG00000176761 9606 + 19:44467641-44473227 unprocessed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartLungOvaryPlacentaTestisENST00000561698
Transcript ID Adrenal Brain Breast Colon Heart Lung Ovary Placenta Testis
ENST00000561698 0.107±0.00 0.019±0.00 0.026±0.00 0.024±0.00 0.034±0.00 0.116±0.00 0.042±0.02 0.043±0.02 0.077±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00044G CIL_00044G_0004 CGP 19:44417519-44500524

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000163475 2610021A01Rik-001 protein_coding Mus_musculus 0.000009 57
ENSMUST00000180507 Zfp493-003 retained_intron Mus_musculus 0.00003 55
ENSMUST00000164936 Zfp493-001 protein_coding Mus_musculus 0.00003 55
ENSMUST00000091520 Zfp85-201 protein_coding Mus_musculus 0.00003 55
ENSMUST00000144183 Zfp85-001 protein_coding Mus_musculus 0.00003 55
ENSMUST00000190566 Zfp708-002 protein_coding Mus_musculus 0.00003 55
ENSMUST00000109742 Zfp708-001 protein_coding Mus_musculus 0.00003 55
ENSMUST00000109743 RSLCAN18-202 protein_coding Mus_musculus 0.00003 55
ENSMUST00000186303 RSLCAN18-001 nonsense_mediated_decay Mus_musculus 0.00003 55
ENSMUST00000185856 RSLCAN18-004 processed_transcript Mus_musculus 0.00003 55
ENSMUST00000167565 Zfp712-201 protein_coding Mus_musculus 0.00003 55

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