C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | spastic paraplegia 7 (pure and complicated autosomal recessive) | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000566682  |
SPG7-019 |
ENSG00000197912 |
9606 | + |
16:89553064-89555002  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008HA | CIL_0008HA_0001 | VISTA | 16:89018329-89621235 |
| CIL_000332 | CIL_000332_0001 | CGP | 16:89267627-89557768 |
| CIL_000331 | CIL_000331_0001 | CGP | 16:89490917-89566828 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0004222 | IEA | metalloendopeptidase activity |
| GO:0005524 | IEA | ATP binding |
| GO:0006508 | IEA | proteolysis |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000108868
|
Spg7-201 | protein_coding | Mus_musculus | 0 | 326 |
|
ENSMUST00000128803
|
Spg7-002 | retained_intron | Mus_musculus | 0 | 326 |
|
ENSMUST00000153285
|
Spg7-011 | protein_coding | Mus_musculus | 0 | 326 |
|
ENSMUST00000149248
|
Spg7-001 | protein_coding | Mus_musculus | 0 | 326 |
|
ENSMUST00000125975
|
Spg7-003 | protein_coding | Mus_musculus | 0 | 326 |
|
ENSMUST00000128234
|
Spg7-005 | protein_coding | Mus_musculus | 8e-23 | 111 |
