C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CUGBP, Elav-like family member 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000567083 CELF6-002 ENSG00000140488 9606 - 15:72286248-72319882 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

No expression data.

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0000381 IDA regulation of alternative mRNA splicing, via spliceosome
GO:0003676 IEA nucleic acid binding
GO:0003723 NAS RNA binding
GO:0005634 NAS nucleus
GO:0005737 NAS cytoplasm
GO:0006397 IEA mRNA processing

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000034840 Celf6-001 protein_coding Mus_musculus 0 1748
ENSMUST00000118549 Celf6-005 protein_coding Mus_musculus 0 1419
ENSMUST00000118164 Celf6-003 protein_coding Mus_musculus 0 1179
ENSMUST00000121266 Celf6-002 protein_coding Mus_musculus 0 1175
ENSMUST00000143916 Celf6-004 nonsense_mediated_decay Mus_musculus 0 987
ENSMUST00000129357 Celf6-006 nonsense_mediated_decay Mus_musculus 0 763
ENSMUST00000129728 Celf6-008 retained_intron Mus_musculus 0 464
ENSMUST00000120508 Celf5-003 protein_coding Mus_musculus 0 451
ENSMUST00000118763 Celf5-001 protein_coding Mus_musculus 0 442
ENSMUST00000128494 Celf5-006 retained_intron Mus_musculus 0 291

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