C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CUGBP, Elav-like family member 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000120508 Celf5-003 ENSMUSG00000034818 10090 - 10:81461548-81482684 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastHeartKidneyLungMuscleOvaryPlacentaTestisENSMUST00000120508
Transcript ID Adipose Adrenal Brain Breast Heart Kidney Lung Muscle Ovary Placenta Testis
ENSMUST00000120508 0.108±0.02 0.296±0.08 24.402±1.65 0.262±0.17 0.026±0.00 0.058±0.05 0.127±0.06 0.013±0.00 0.207±0.14 0.068±0.02 18.779±1.91

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003674 ND molecular_function
GO:0003676 IEA nucleic acid binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000093312 celf5a-001 protein_coding Danio_rerio 0 359
ENSDART00000024206 celf3b-201 protein_coding Danio_rerio 1.4013e-45 189
ENSDART00000148426 celf3b-001 protein_coding Danio_rerio 1.4013e-45 189
ENSDART00000151315 celf3a-002 retained_intron Danio_rerio 9.99995e-41 172
ENSDART00000039629 celf3a-001 protein_coding Danio_rerio 9.99995e-41 172
ENSDART00000093310 celf5a-201 protein_coding Danio_rerio 6e-28 130
ENST00000287202 CELF6-001 protein_coding Homo_sapiens 0 451
ENST00000292672 CELF5-001 protein_coding Homo_sapiens 0 1371
ENST00000334293 CELF5-004 nonsense_mediated_decay Homo_sapiens 0 1441
ENST00000379915 RP11-106M3.2-001 nonsense_mediated_decay Homo_sapiens 0 383
ENST00000437872 CELF6-008 nonsense_mediated_decay Homo_sapiens 0 292
ENST00000541430 CELF5-002 protein_coding Homo_sapiens 0 1050
ENST00000567083 CELF6-002 protein_coding Homo_sapiens 0 451
ENST00000569547 CELF6-001 nonsense_mediated_decay Homo_sapiens 0 451
ENST00000586050 CELF5-008 processed_transcript Homo_sapiens 0 270
ENST00000588101 CELF5-007 processed_transcript Homo_sapiens 0 344
ENST00000588350 CELF5-005 nonsense_mediated_decay Homo_sapiens 0 1304
ENST00000589370 CELF5-009 processed_transcript Homo_sapiens 0 758
ENST00000591483 CELF5-006 retained_intron Homo_sapiens 0 455

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