C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: agouti signaling protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000568305 ASIP-002 ENSG00000101440 9606 + 20:34194569-34269176 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonTestisENST00000568305
Transcript ID Breast Colon Testis
ENST00000568305 0.046±0.00 0.032±0.00 0.332±0.09

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00098F CIL_00098F_0001 VISTA 20:33968769-34569610

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005102 TAS:IEA receptor binding
GO:0005515 IEA protein binding
GO:0005576 IEA extracellular region
GO:0005615 TAS extracellular space
GO:0006091 IEA generation of precursor metabolites and energy
GO:0007165 TAS signal transduction
GO:0007267 TAS cell-cell signaling
GO:0008343 IEA adult feeding behavior
GO:0009755 IEA hormone-mediated signaling pathway
GO:0031779 IEA melanocortin receptor binding
GO:0031781 IEA type 3 melanocortin receptor binding
GO:0031782 IEA type 4 melanocortin receptor binding
GO:0032402 IEA melanosome transport
GO:0032438 IEA melanosome organization
GO:0040030 IEA regulation of molecular function, epigenetic
GO:0042438 IEA melanin biosynthetic process
GO:0043473 IEA pigmentation
GO:0071514 IEA genetic imprinting

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000029123 a-001 protein_coding Mus_musculus 0 374
ENSMUST00000109697 a-004 protein_coding Mus_musculus 0 374
ENSMUST00000148300 a-006 retained_intron Mus_musculus 0 235

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