C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | CUGBP, Elav-like family member 6 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000569547  |
CELF6-001 |
ENSG00000273025 |
9606 | - |
15:72266746-72319946  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0004GV | CIL_0004GV_0002 | CGP | 15:72199029-72272999 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0000166 | IEA | nucleotide binding |
| GO:0000381 | IDA | regulation of alternative mRNA splicing, via spliceosome |
| GO:0003676 | IEA | nucleic acid binding |
| GO:0003723 | NAS | RNA binding |
| GO:0005634 | NAS | nucleus |
| GO:0005737 | NAS | cytoplasm |
| GO:0006397 | IEA | mRNA processing |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000118549
|
Celf6-005 | protein_coding | Mus_musculus | 0 | 1965 |
|
ENSMUST00000034840
|
Celf6-001 | protein_coding | Mus_musculus | 0 | 1362 |
|
ENSMUST00000129357
|
Celf6-006 | nonsense_mediated_decay | Mus_musculus | 0 | 1280 |
|
ENSMUST00000143916
|
Celf6-004 | nonsense_mediated_decay | Mus_musculus | 0 | 881 |
|
ENSMUST00000118164
|
Celf6-003 | protein_coding | Mus_musculus | 0 | 773 |
|
ENSMUST00000121266
|
Celf6-002 | protein_coding | Mus_musculus | 0 | 771 |
|
ENSMUST00000129728
|
Celf6-008 | retained_intron | Mus_musculus | 0 | 523 |
|
ENSMUST00000120508
|
Celf5-003 | protein_coding | Mus_musculus | 0 | 451 |
|
ENSMUST00000118763
|
Celf5-001 | protein_coding | Mus_musculus | 0 | 442 |
|
ENSMUST00000050483
|
Parp6-202 | protein_coding | Mus_musculus | 0 | 327 |
|
ENSMUST00000026267
|
Parp6-201 | protein_coding | Mus_musculus | 0 | 327 |
|
ENSMUST00000167091
|
Parp6-203 | protein_coding | Mus_musculus | 0 | 326 |
|
ENSMUST00000128494
|
Celf5-006 | retained_intron | Mus_musculus | 0 | 291 |
