C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitin specific peptidase 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000575709 USP6-003 ENSG00000129204 9606 + 17:5128392-5175032 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonTestisENST00000575709
Transcript ID Adrenal Breast Colon Testis
ENST00000575709 0.057±0.00 0.050±0.00 0.106±0.00 0.263±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005097 IEA Rab GTPase activator activity
GO:0032313 IEA regulation of Rab GTPase activity
GO:0032851 IEA positive regulation of Rab GTPase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000108075 Usp32-001 protein_coding Mus_musculus 0 3781
ENSMUST00000000821 Usp32-003 nonsense_mediated_decay Mus_musculus 0 2529
ENSMUST00000173156 Usp32-004 protein_coding Mus_musculus 0 379
ENSMUST00000174602 Usp32-005 protein_coding Mus_musculus 0 209

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