C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Uncharacterized protein {ECO:0000313|Ensembl:ENSP00000477472}
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000575785 LA16c-306E5.2-001 ENSG00000262621 9606 + 16:3365112-3486953 nonsense_mediated_decay

Expression Patterns

No expression data.

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IEA negative regulation of transcription from RNA polymerase II promoter
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000186375 Naa60-201 protein_coding Mus_musculus 0 1114
ENSMUST00000006138 Naa60-010 nonsense_mediated_decay Mus_musculus 0 1114
ENSMUST00000115860 Naa60-002 nonsense_mediated_decay Mus_musculus 0 1112
ENSMUST00000150655 Naa60-001 protein_coding Mus_musculus 0 1101
ENSMUST00000176625 Naa60-011 protein_coding Mus_musculus 0 905
ENSMUST00000151988 Naa60-009 protein_coding Mus_musculus 0 780
ENSMUST00000140832 Naa60-008 retained_intron Mus_musculus 0 540
ENSMUST00000143537 Naa60-006 nonsense_mediated_decay Mus_musculus 0 538
ENSMUST00000176233 Gm20695-001 protein_coding Mus_musculus 0 536
ENSMUST00000176224 Naa60-005 protein_coding Mus_musculus 0 523
ENSMUST00000175809 Naa60-007 protein_coding Mus_musculus 0 399
ENSMUST00000147949 Naa60-004 nonsense_mediated_decay Mus_musculus 0 219
ENSMUST00000135093 Naa60-003 nonsense_mediated_decay Mus_musculus 0 195
ENSMUST00000006139 1700037C18Rik-002 nonsense_mediated_decay Mus_musculus 8.00001e-42 176
ENSMUST00000177519 1700037C18Rik-004 processed_transcript Mus_musculus 2e-23 115

Loading