C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA 1700037C18 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000006139 1700037C18Rik-002 ENSMUSG00000005983 10090 - 16:3895181-3907757 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENSMUST00000006139
Transcript ID Testis
ENSMUST00000006139 136.315±20.53

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000AU CIL_0000AU_0002 CGP 16:3858321-3904780
CIL_0005EX CIL_0005EX_0002 CGP 16:3895179-3941147

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000360862 NAA60-003 protein_coding Homo_sapiens 7.00649e-43 180
ENST00000407558 NAA60-001 protein_coding Homo_sapiens 9.99967e-42 176
ENST00000414063 NAA60-006 protein_coding Homo_sapiens 9.99967e-42 176
ENST00000421765 NAA60-004 protein_coding Homo_sapiens 3.99931e-42 176
ENST00000424546 NAA60-002 protein_coding Homo_sapiens 3.99931e-42 176
ENST00000570372 NAA60-013 protein_coding Homo_sapiens 1.00053e-42 176
ENST00000570819 NAA60-034 protein_coding Homo_sapiens 3.00018e-42 176
ENST00000571107 NAA60-033 processed_transcript Homo_sapiens 1.99965e-42 176
ENST00000572131 NAA60-028 protein_coding Homo_sapiens 1.99965e-42 176
ENST00000572169 NAA60-011 protein_coding Homo_sapiens 1.99965e-42 176
ENST00000572584 NAA60-008 protein_coding Homo_sapiens 9.00054e-42 176
ENST00000572739 NAA60-024 nonsense_mediated_decay Homo_sapiens 3.00018e-42 176
ENST00000572757 NAA60-010 protein_coding Homo_sapiens 3.00018e-42 176
ENST00000572942 NAA60-009 protein_coding Homo_sapiens 3.99931e-42 176
ENST00000573201 NAA60-017 protein_coding Homo_sapiens 1.99965e-42 176
ENST00000573580 NAA60-019 protein_coding Homo_sapiens 8.00141e-43 178
ENST00000573593 NAA60-012 protein_coding Homo_sapiens 1.99965e-42 176
ENST00000574328 NAA60-023 protein_coding Homo_sapiens 1.99965e-42 176
ENST00000574950 NAA60-018 protein_coding Homo_sapiens 1.99965e-42 176
ENST00000575076 NAA60-007 protein_coding Homo_sapiens 9.00054e-42 176
ENST00000575733 NAA60-016 protein_coding Homo_sapiens 3.00018e-42 176
ENST00000575785 LA16c-306E5.2-001 nonsense_mediated_decay Homo_sapiens 8.00001e-42 176
ENST00000575936 NAA60-014 processed_transcript Homo_sapiens 1.99965e-42 176
ENST00000576787 NAA60-026 protein_coding Homo_sapiens 1.99965e-42 176
ENST00000576916 NAA60-005 protein_coding Homo_sapiens 6.00036e-42 176
ENST00000577013 NAA60-029 protein_coding Homo_sapiens 1.99965e-42 176

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