C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000577519 RP11-578C11.2-001 ENSG00000266356 9606 - 17:27411438-27412806 unprocessed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastKidneyMuscleOvaryTestisENST00000577519
Transcript ID Brain Breast Kidney Muscle Ovary Testis
ENST00000577519 0.457±0.00 0.108±0.00 0.107±0.00 0.095±0.00 8.611±0.00 0.100±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007SM CIL_0007SM_0001 VISTA 17:27271510-27874835

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000155057 Ywhae-004 retained_intron Mus_musculus 4e-39 163
ENSMUST00000131398 Ywhae-005 protein_coding Mus_musculus 4e-39 163
ENSMUST00000153038 Ywhae-003 retained_intron Mus_musculus 4e-39 163
ENSMUST00000067664 Ywhae-001 protein_coding Mus_musculus 4e-39 163
ENSMUST00000134745 Ywhae-002 nonsense_mediated_decay Mus_musculus 5e-28 126
ENSDART00000011303 ywhae2-001 protein_coding Danio_rerio 8e-16 86

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