C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane protein 200C
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000581347 TMEM200C-001 ENSG00000206432 9606 - 18:5882072-5895955 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000581347
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000581347 0.013±0.00 0.157±0.00 0.201±0.00 0.490±0.00 0.052±0.00 0.068±0.01 0.021±0.00 0.156±0.06 0.071±0.00 0.072±0.02 0.025±0.00 0.093±0.03 0.003±0.00 0.108±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005QZ CIL_0005QZ_0002 CGP 18:5392381-5895955

Gene Ontology

GO IDEvidence TypeGO Description
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000178545 Tmem200c-201 protein_coding Mus_musculus 0 1539
ENSDART00000128028 CABZ01081294.1-201 protein_coding Danio_rerio 5e-35 156
ENSDART00000130464 TMEM200C (1 of 2)-201 protein_coding Danio_rerio 5e-30 139

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