C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitin-like 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000586895 UBL5-002 ENSG00000198258 9606 + 19:9827892-9830114 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000586895
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000586895 89.448±0.00 164.814±0.00 117.810±90.99 149.375±0.00 108.998±101.74 112.267±101.92 127.389±105.92 81.775±77.29 122.548±113.07 69.194±54.90 236.251±185.23 161.153±82.96 183.875±143.94

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000UP CIL_0000UP_0001 CGP 19:9810267-9830115
CIL_0005J0 CIL_0005J0_0001 CGP 19:9827892-9849682

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IPI:IEA protein binding
GO:0005737 IDA cytoplasm
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000129414 Ubl5-001 protein_coding Mus_musculus 0 331
ENSMUST00000160682 Ubl5-012 protein_coding Mus_musculus 0 322
ENSMUST00000160874 Ubl5-007 nonsense_mediated_decay Mus_musculus 0 296
ENSMUST00000160124 Ubl5-009 protein_coding Mus_musculus 0 287
ENSMUST00000162303 Ubl5-004 protein_coding Mus_musculus 0 285
ENSMUST00000161887 Ubl5-003 protein_coding Mus_musculus 0 235
ENSMUST00000161882 Ubl5-008 protein_coding Mus_musculus 0 228
ENSMUST00000161486 Ubl5-005 protein_coding Mus_musculus 0 222
ENSMUST00000154429 Ubl5-002 retained_intron Mus_musculus 0 209
ENSMUST00000161834 Ubl5-011 protein_coding Mus_musculus 2e-31 139
ENSMUST00000161595 Ubl5-006 retained_intron Mus_musculus 9e-30 134

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