C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger protein 227
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000589005 ZNF227-003 ENSG00000131115 9606 + 19:44212575-44237267 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonKidneyLiverLungOvaryPlacentaENST00000589005
Transcript ID Adrenal Breast Colon Kidney Liver Lung Ovary Placenta
ENST00000589005 1.217±0.00 0.949±0.00 2.726±0.00 0.464±0.00 0.170±0.00 1.252±0.00 0.738±0.03 0.434±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003UP CIL_0003UP_0005 CGP 19:44165073-44237268
CIL_0003UP CIL_0003UP_0004 CGP 19:44207547-44305046

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0003700 IBA sequence-specific DNA binding transcription factor activity
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IBA:IEA regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000005413 Zfp112-001 protein_coding Mus_musculus 0 302
ENSMUST00000120006 Zfp112-002 protein_coding Mus_musculus 0 302
ENSMUST00000156218 Zfp938-002 nonsense_mediated_decay Mus_musculus 0.000000007 68
ENSMUST00000041264 Zfp938-001 protein_coding Mus_musculus 0.000000007 68
ENSMUST00000189452 Zfp119b-002 protein_coding Mus_musculus 0.0000003 62
ENSMUST00000056147 Zfp119b-001 protein_coding Mus_musculus 0.0000003 62
ENSMUST00000073312 Zfp760-201 protein_coding Mus_musculus 0.00005 55
ENSDART00000122219 si:dkey-15h8.13-002 processed_transcript Danio_rerio 0.00005 55
ENSDART00000143012 si:dkey-15h8.13-001 protein_coding Danio_rerio 0.00005 55

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