C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: potassium inwardly-rectifying channel, subfamily J, member 16
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000589377 KCNJ16-002 ENSG00000153822 9606 + 17:70075321-70135608 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENST00000589377
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENST00000589377 0.082±0.00 0.027±0.00 0.114±0.00 0.059±0.00 0.003±0.00 23.326±23.18 0.082±0.01 0.087±0.00 0.255±0.03 0.394±0.00 1.359±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00072F CIL_00072F_0001 CGP 17:69414698-70135608
CIL_0001L0 CIL_0001L0_0002 CGP 17:70053429-70180048

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005242 IEA:NAS inward rectifier potassium channel activity
GO:0005886 TAS plasma membrane
GO:0006813 NAS:IEA potassium ion transport
GO:0007268 TAS synaptic transmission
GO:0008076 NAS voltage-gated potassium channel complex
GO:0016021 IEA integral component of membrane
GO:0034765 IEA regulation of ion transmembrane transport
GO:0071805 IEA potassium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000178798 Kcnj16-201 protein_coding Mus_musculus 0 1267
ENSMUST00000180023 Kcnj16-202 protein_coding Mus_musculus 0 1267
ENSMUST00000106635 Kcnj16-002 protein_coding Mus_musculus 0 1267
ENSMUST00000106636 Kcnj16-001 protein_coding Mus_musculus 0 1267

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