C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger protein 180
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000592529 ZNF180-004 ENSG00000167384 9606 - 19:44475644-44500523 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainColonHeartOvaryPlacentaTestisENST00000592529
Transcript ID Adrenal Bladder Brain Colon Heart Ovary Placenta Testis
ENST00000592529 1.337±0.00 0.069±0.00 0.397±0.00 0.754±0.00 0.578±0.00 0.356±0.30 0.361±0.08 0.745±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00044G CIL_00044G_0004 CGP 19:44417519-44500524

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0005622 IEA intracellular
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000092720 5430403G16Rik-001 protein_coding Mus_musculus 1e-36 159
ENSMUST00000040667 Zfp300-001 protein_coding Mus_musculus 7e-34 150
ENSMUST00000178901 Zfp872-001 protein_coding Mus_musculus 3e-27 128
ENSMUST00000073782 Zfp937-001 protein_coding Mus_musculus 7e-24 117
ENSMUST00000080987 Zfp869-201 protein_coding Mus_musculus 3e-22 111
ENSMUST00000122407 Gm12591-001 unprocessed_pseudogene Mus_musculus 3e-17 95
ENSMUST00000107989 Gm3604-201 protein_coding Mus_musculus 3e-17 95
ENSMUST00000187656 Gm3604-001 protein_coding Mus_musculus 3e-17 95
ENSMUST00000167565 Zfp712-201 protein_coding Mus_musculus 0.0000000000003 82
ENSMUST00000099439 Gm4767-201 protein_coding Mus_musculus 0.00000000001 77
ENSMUST00000188096 Gm4767-001 protein_coding Mus_musculus 0.00000000001 77
ENSMUST00000105315 Gm10778-201 protein_coding Mus_musculus 0.00000000001 77
ENSMUST00000189672 Gm10778-001 protein_coding Mus_musculus 0.00000000001 77
ENSMUST00000098596 Zfp382-001 protein_coding Mus_musculus 0.000001 60

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