C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cytochrome P450, family 4, subfamily F, polypeptide 23, pseudogene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000593402 CYP4F23P-001 ENSG00000269516 9606 + 19:15564074-15584709 transcribed_unprocessed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastKidneyLiverOvaryTestisENST00000593402
Transcript ID Brain Breast Kidney Liver Ovary Testis
ENST00000593402 0.051±0.00 0.027±0.01 0.046±0.00 0.287±0.00 0.218±0.14 0.089±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00019Y CIL_00019Y_0001 CGP 19:15508493-15630638

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000165999 Cyp4f17-201 protein_coding Mus_musculus 0 952
ENSMUST00000075253 Cyp4f13-001 protein_coding Mus_musculus 0 941
ENSMUST00000003416 Cyp4f16-003 protein_coding Mus_musculus 0 915
ENSMUST00000169591 Cyp4f16-001 protein_coding Mus_musculus 0 915
ENSMUST00000077639 Cyp4f37-201 protein_coding Mus_musculus 0 870
ENSMUST00000054174 Cyp4f14-201 protein_coding Mus_musculus 0 863
ENSMUST00000179434 Cyp4f14-202 protein_coding Mus_musculus 0 863
ENSMUST00000165515 Cyp4f16-002 nonsense_mediated_decay Mus_musculus 0 857
ENSMUST00000003574 Cyp4f18-001 protein_coding Mus_musculus 0 784
ENSMUST00000165061 Cyp4f40-201 protein_coding Mus_musculus 0 773
ENSMUST00000168346 Cyp4f16-004 retained_intron Mus_musculus 0 652
ENSMUST00000137222 Cyp4f13-004 nonsense_mediated_decay Mus_musculus 0 645
ENSMUST00000139353 Cyp4f13-002 protein_coding Mus_musculus 0 645
ENSMUST00000169252 Cyp4f16-005 nonsense_mediated_decay Mus_musculus 0 542
ENSMUST00000170956 Cyp4f16-007 processed_transcript Mus_musculus 0 337
ENSMUST00000163736 Cyp4f16-008 retained_intron Mus_musculus 0 246
ENSMUST00000141325 Cyp4f13-006 nonsense_mediated_decay Mus_musculus 6.00036e-42 176
ENSMUST00000123653 Cyp4f13-007 retained_intron Mus_musculus 0.0000000000005 81

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