C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: dystrobrevin, alpha
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000598334 DTNA-025 ENSG00000134769 9606 + 18:34593339-34891140 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonLiverPlacentaTestisENST00000598334
Transcript ID Adrenal Breast Colon Liver Placenta Testis
ENST00000598334 1.817±0.00 1.167±0.00 2.010±0.00 12.542±0.00 0.450±0.10 1.459±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006PG CIL_0006PG_0001 CGP 18:33851100-34891844
CIL_00064W CIL_00064W_0001 CGP 18:34493290-35143470

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005515 IPI protein binding
GO:0005737 IEA cytoplasm
GO:0006941 TAS striated muscle contraction
GO:0007165 TAS signal transduction
GO:0007268 TAS synaptic transmission
GO:0007274 TAS neuromuscular synaptic transmission
GO:0008270 IEA zinc ion binding
GO:0030054 IEA cell junction
GO:0030165 IEA PDZ domain binding
GO:0030424 IEA axon
GO:0031234 IEA extrinsic component of cytoplasmic side of plasma membrane
GO:0042383 IEA sarcolemma
GO:0042995 IEA cell projection
GO:0043234 IDA protein complex
GO:0045202 IEA synapse

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000115832 Dtna-202 protein_coding Mus_musculus 0 2761
ENSMUST00000047954 Dtna-201 protein_coding Mus_musculus 0 1727
ENSDART00000042290 dtna-002 protein_coding Danio_rerio 0 442
ENSDART00000105680 dtna-001 protein_coding Danio_rerio 0 422

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