C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: eukaryotic translation initiation factor 4 gamma, 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000602326 EIF4G3-011 ENSG00000075151 9606 - 1:20806483-21176850 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastHeartLiverLungMuscleOvaryPlacentaTestisENST00000602326
Transcript ID Adipose Brain Breast Heart Liver Lung Muscle Ovary Placenta Testis
ENST00000602326 4.646±0.00 6.473±1.77 2.629±0.09 1.562±1.18 2.021±0.00 2.503±0.01 3.780±0.00 2.936±1.26 1.440±0.00 11.027±0.49

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002W8 CIL_0002W8_0002 CGP 1:20806292-21345504

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000339 TAS RNA cap binding
GO:0003723 IEA RNA binding
GO:0003743 IEA translation initiation factor activity
GO:0005488 IEA binding
GO:0005515 IEA protein binding
GO:0005829 TAS cytosol
GO:0006413 IEA translational initiation
GO:0006446 TAS regulation of translational initiation
GO:0008135 TAS translation factor activity, nucleic acid binding
GO:0016032 IEA viral process
GO:0016281 TAS eukaryotic translation initiation factor 4F complex
GO:0019221 TAS cytokine-mediated signaling pathway
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000084215 Eif4g3-001 protein_coding Mus_musculus 0 5952
ENSMUST00000105831 Eif4g3-202 protein_coding Mus_musculus 0 3956
ENSMUST00000084214 Eif4g3-201 protein_coding Mus_musculus 0 3310
ENSMUST00000140796 Eif4g3-008 protein_coding Mus_musculus 0 2004
ENSMUST00000105830 Eif4g3-002 protein_coding Mus_musculus 0 1945
ENSMUST00000133902 Eif4g3-009 processed_transcript Mus_musculus 0 1666
ENSMUST00000139759 Eif4g3-007 protein_coding Mus_musculus 0 1387
ENSMUST00000155142 Eif4g3-004 protein_coding Mus_musculus 0 771
ENSMUST00000058133 Eif4g3-003 protein_coding Mus_musculus 0 699
ENSDART00000087110 eif4g3b-201 protein_coding Danio_rerio 0 556
ENSDART00000145172 eif4g3b-001 protein_coding Danio_rerio 0 556
ENSMUST00000132194 Eif4g3-005 processed_transcript Mus_musculus 0 401
ENSDART00000111576 EIF4G3 (2 of 2)-201 protein_coding Danio_rerio 0 316
ENSMUST00000148074 Eif4g3-012 processed_transcript Mus_musculus 0 309
ENSMUST00000127707 Eif4g3-006 processed_transcript Mus_musculus 0 267

Loading